Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CTSDP07339 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CTSDP07339 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CTSDP07339 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 HLA-A-202ENST00000376806 1854 ntBASIC14.31□□□□□ -0.12
CTSDP07339 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.31□□□□□ -0.12
CTSDP07339 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CTSDP07339 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CTSDP07339 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CTSDP07339 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTSDP07339 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 AC010460.3-201ENST00000511359 1579 ntBASIC14.3□□□□□ -0.12
CTSDP07339 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.3□□□□□ -0.12
CTSDP07339 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CTSDP07339 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.3□□□□□ -0.12
CTSDP07339 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CTSDP07339 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CTSDP07339 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 ECEL1P3-201ENST00000427961 737 ntBASIC14.3□□□□□ -0.12
CTSDP07339 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.3□□□□□ -0.12
CTSDP07339 TSPY15P-201ENST00000457163 923 ntBASIC14.3□□□□□ -0.12
CTSDP07339 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CTSDP07339 AC109462.3-201ENST00000573934 613 ntBASIC14.3□□□□□ -0.12
CTSDP07339 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.3□□□□□ -0.12
CTSDP07339 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CTSDP07339 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CTSDP07339 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CTSDP07339 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTSDP07339 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CTSDP07339 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
CTSDP07339 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 RASA4DP-201ENST00000460726 1199 ntBASIC14.29□□□□□ -0.12
CTSDP07339 ECEL1P2-202ENST00000465689 757 ntBASIC14.29□□□□□ -0.12
CTSDP07339 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.29□□□□□ -0.12
CTSDP07339 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 GCSHP2-201ENST00000560971 527 ntBASIC14.29□□□□□ -0.12
CTSDP07339 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.29□□□□□ -0.12
CTSDP07339 AC079602.3-201ENST00000623931 403 ntBASIC14.29□□□□□ -0.12
CTSDP07339 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CTSDP07339 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CTSDP07339 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
CTSDP07339 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms