Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.28■□□□□ 0.2
MT-ND1P03886 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MT-ND1P03886 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
MT-ND1P03886 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
MT-ND1P03886 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.27■□□□□ 0.2
MT-ND1P03886 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.27■□□□□ 0.2
MT-ND1P03886 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.27■□□□□ 0.2
MT-ND1P03886 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.27■□□□□ 0.2
MT-ND1P03886 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.27■□□□□ 0.2
MT-ND1P03886 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 COX11P1-201ENST00000489116 835 ntBASIC16.27■□□□□ 0.2
MT-ND1P03886 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.27■□□□□ 0.2
MT-ND1P03886 AC010203.1-204ENST00000548782 407 ntBASIC16.27■□□□□ 0.2
MT-ND1P03886 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.27■□□□□ 0.2
MT-ND1P03886 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.27■□□□□ 0.2
MT-ND1P03886 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 AC004263.2-201ENST00000617183 678 ntBASIC16.27■□□□□ 0.2
MT-ND1P03886 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MT-ND1P03886 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
MT-ND1P03886 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MT-ND1P03886 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MT-ND1P03886 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MT-ND1P03886 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
MT-ND1P03886 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
MT-ND1P03886 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.27■□□□□ 0.19
MT-ND1P03886 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MT-ND1P03886 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
MT-ND1P03886 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MT-ND1P03886 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.27■□□□□ 0.19
MT-ND1P03886 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-ND1P03886 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND1P03886 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 AL391807.1-203ENST00000604392 2365 ntBASIC16.26■□□□□ 0.19
MT-ND1P03886 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MT-ND1P03886 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.26■□□□□ 0.19
MT-ND1P03886 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND1P03886 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MT-ND1P03886 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.26■□□□□ 0.19
MT-ND1P03886 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND1P03886 AL136038.4-201ENST00000603606 1261 ntBASIC16.26■□□□□ 0.19
MT-ND1P03886 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MT-ND1P03886 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.26■□□□□ 0.19
MT-ND1P03886 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND1P03886 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND1P03886 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.25■□□□□ 0.19
MT-ND1P03886 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-ND1P03886 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
MT-ND1P03886 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-ND1P03886 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
MT-ND1P03886 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
MT-ND1P03886 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.25■□□□□ 0.19
MT-ND1P03886 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.25■□□□□ 0.19
MT-ND1P03886 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.25■□□□□ 0.19
MT-ND1P03886 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-ND1P03886 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms