Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.81□□□□□ -0.2
APOC3P02656 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.81□□□□□ -0.2
APOC3P02656 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
APOC3P02656 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 CICP24-201ENST00000605464 2705 ntBASIC13.81□□□□□ -0.2
APOC3P02656 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
APOC3P02656 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.81□□□□□ -0.2
APOC3P02656 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.81□□□□□ -0.2
APOC3P02656 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.81□□□□□ -0.2
APOC3P02656 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.81□□□□□ -0.2
APOC3P02656 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.81□□□□□ -0.2
APOC3P02656 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.81□□□□□ -0.2
APOC3P02656 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.81□□□□□ -0.2
APOC3P02656 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.81□□□□□ -0.2
APOC3P02656 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
APOC3P02656 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.81□□□□□ -0.2
APOC3P02656 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.81□□□□□ -0.2
APOC3P02656 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
APOC3P02656 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOC3P02656 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 RCC2P3-201ENST00000418112 1537 ntBASIC13.8□□□□□ -0.2
APOC3P02656 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 TUBB8P6-201ENST00000436895 1288 ntBASIC13.8□□□□□ -0.2
APOC3P02656 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.8□□□□□ -0.2
APOC3P02656 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.8□□□□□ -0.2
APOC3P02656 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOC3P02656 AL122018.1-201ENST00000446607 2310 ntBASIC13.8□□□□□ -0.2
APOC3P02656 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOC3P02656 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
APOC3P02656 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.79□□□□□ -0.2
APOC3P02656 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
APOC3P02656 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms