Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.38■□□□□ 0.53
TIMP1P01033 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
TIMP1P01033 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TIMP1P01033 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.37■□□□□ 0.53
TIMP1P01033 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.37■□□□□ 0.53
TIMP1P01033 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 LYSMD4-203ENST00000378904 2122 ntBASIC18.37■□□□□ 0.53
TIMP1P01033 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.37■□□□□ 0.53
TIMP1P01033 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.37■□□□□ 0.53
TIMP1P01033 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.37■□□□□ 0.53
TIMP1P01033 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.37■□□□□ 0.53
TIMP1P01033 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TIMP1P01033 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.37■□□□□ 0.53
TIMP1P01033 AC010336.2-201ENST00000564226 506 ntBASIC18.37■□□□□ 0.53
TIMP1P01033 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.37■□□□□ 0.53
TIMP1P01033 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.37■□□□□ 0.53
TIMP1P01033 AC073389.1-201ENST00000595595 795 ntBASIC18.37■□□□□ 0.53
TIMP1P01033 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 AL035456.1-201ENST00000456064 1369 ntBASIC18.37■□□□□ 0.53
TIMP1P01033 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
TIMP1P01033 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.37■□□□□ 0.53
TIMP1P01033 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.37■□□□□ 0.53
TIMP1P01033 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TIMP1P01033 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TIMP1P01033 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TIMP1P01033 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TIMP1P01033 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TIMP1P01033 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
TIMP1P01033 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.36■□□□□ 0.53
TIMP1P01033 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TIMP1P01033 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.36■□□□□ 0.53
TIMP1P01033 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.36■□□□□ 0.53
TIMP1P01033 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TIMP1P01033 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TIMP1P01033 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.36■□□□□ 0.53
TIMP1P01033 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.36■□□□□ 0.53
TIMP1P01033 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.36■□□□□ 0.53
TIMP1P01033 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.36■□□□□ 0.53
TIMP1P01033 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.36■□□□□ 0.53
TIMP1P01033 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.36■□□□□ 0.53
TIMP1P01033 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 AC017083.2-201ENST00000608069 979 ntBASIC18.36■□□□□ 0.53
TIMP1P01033 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TIMP1P01033 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TIMP1P01033 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TIMP1P01033 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.35■□□□□ 0.53
TIMP1P01033 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.35■□□□□ 0.53
TIMP1P01033 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TIMP1P01033 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.35■□□□□ 0.53
TIMP1P01033 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TIMP1P01033 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TIMP1P01033 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.35■□□□□ 0.53
TIMP1P01033 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.35■□□□□ 0.53
TIMP1P01033 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.35■□□□□ 0.53
TIMP1P01033 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.35■□□□□ 0.53
TIMP1P01033 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.35■□□□□ 0.53
TIMP1P01033 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.35■□□□□ 0.53
TIMP1P01033 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
TIMP1P01033 TEX28P1-201ENST00000613479 1221 ntBASIC18.35■□□□□ 0.53
TIMP1P01033 TEX28P2-201ENST00000617764 1221 ntBASIC18.35■□□□□ 0.53
TIMP1P01033 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMP1P01033 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.34■□□□□ 0.53
TIMP1P01033 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms