Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.01■□□□□ 0.47
TRUB2O95900 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.01■□□□□ 0.47
TRUB2O95900 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.01■□□□□ 0.47
TRUB2O95900 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.01■□□□□ 0.47
TRUB2O95900 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.01■□□□□ 0.47
TRUB2O95900 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.01■□□□□ 0.47
TRUB2O95900 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.01■□□□□ 0.47
TRUB2O95900 AC012640.2-201ENST00000561606 901 ntBASIC18.01■□□□□ 0.47
TRUB2O95900 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRUB2O95900 AC006557.2-201ENST00000592985 1240 ntBASIC18.01■□□□□ 0.47
TRUB2O95900 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.01■□□□□ 0.47
TRUB2O95900 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 MIR7706-201ENST00000613747 67 ntBASIC18.01■□□□□ 0.47
TRUB2O95900 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
TRUB2O95900 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.01■□□□□ 0.47
TRUB2O95900 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
TRUB2O95900 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.01■□□□□ 0.47
TRUB2O95900 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.01■□□□□ 0.47
TRUB2O95900 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.01■□□□□ 0.47
TRUB2O95900 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRUB2O95900 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRUB2O95900 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRUB2O95900 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18■□□□□ 0.47
TRUB2O95900 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18■□□□□ 0.47
TRUB2O95900 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
TRUB2O95900 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18■□□□□ 0.47
TRUB2O95900 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18■□□□□ 0.47
TRUB2O95900 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18■□□□□ 0.47
TRUB2O95900 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18■□□□□ 0.47
TRUB2O95900 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18■□□□□ 0.47
TRUB2O95900 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18■□□□□ 0.47
TRUB2O95900 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRUB2O95900 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRUB2O95900 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRUB2O95900 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18■□□□□ 0.47
TRUB2O95900 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRUB2O95900 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRUB2O95900 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRUB2O95900 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRUB2O95900 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.99■□□□□ 0.47
TRUB2O95900 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.99■□□□□ 0.47
TRUB2O95900 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.99■□□□□ 0.47
TRUB2O95900 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 KRT18P27-201ENST00000427733 1299 ntBASIC17.99■□□□□ 0.47
TRUB2O95900 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.99■□□□□ 0.47
TRUB2O95900 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.99■□□□□ 0.47
TRUB2O95900 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRUB2O95900 AC105339.3-201ENST00000560043 636 ntBASIC17.99■□□□□ 0.47
TRUB2O95900 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.99■□□□□ 0.47
TRUB2O95900 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.99■□□□□ 0.47
TRUB2O95900 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.99■□□□□ 0.47
TRUB2O95900 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRUB2O95900 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.99■□□□□ 0.47
TRUB2O95900 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRUB2O95900 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.99■□□□□ 0.47
TRUB2O95900 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRUB2O95900 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRUB2O95900 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRUB2O95900 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRUB2O95900 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRUB2O95900 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRUB2O95900 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRUB2O95900 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRUB2O95900 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms