Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
NKX2-2O95096 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX2-2O95096 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.84■□□□□ 0.13
NKX2-2O95096 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
NKX2-2O95096 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NKX2-2O95096 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NKX2-2O95096 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.84■□□□□ 0.13
NKX2-2O95096 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
NKX2-2O95096 RNPS1P1-201ENST00000507437 918 ntBASIC15.84■□□□□ 0.13
NKX2-2O95096 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.84■□□□□ 0.13
NKX2-2O95096 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.84■□□□□ 0.13
NKX2-2O95096 RN7SL510P-201ENST00000581311 263 ntBASIC15.84■□□□□ 0.13
NKX2-2O95096 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.84■□□□□ 0.13
NKX2-2O95096 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.84■□□□□ 0.13
NKX2-2O95096 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.84■□□□□ 0.13
NKX2-2O95096 AL691432.3-201ENST00000621860 400 ntBASIC15.84■□□□□ 0.13
NKX2-2O95096 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
NKX2-2O95096 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NKX2-2O95096 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
NKX2-2O95096 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
NKX2-2O95096 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NKX2-2O95096 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
NKX2-2O95096 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NKX2-2O95096 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NKX2-2O95096 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NKX2-2O95096 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NKX2-2O95096 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.13
NKX2-2O95096 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 AC004870.1-201ENST00000315132 882 ntBASIC15.83■□□□□ 0.12
NKX2-2O95096 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 FAM197Y8-203ENST00000450145 560 ntBASIC15.83■□□□□ 0.12
NKX2-2O95096 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.83■□□□□ 0.12
NKX2-2O95096 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.83■□□□□ 0.12
NKX2-2O95096 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.83■□□□□ 0.12
NKX2-2O95096 OR7E14P-202ENST00000530490 1290 ntBASIC15.83■□□□□ 0.12
NKX2-2O95096 KRT126P-201ENST00000549467 1181 ntBASIC15.83■□□□□ 0.12
NKX2-2O95096 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.83■□□□□ 0.12
NKX2-2O95096 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.83■□□□□ 0.12
NKX2-2O95096 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
NKX2-2O95096 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.83■□□□□ 0.12
NKX2-2O95096 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX2-2O95096 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 TUBB8P12-201ENST00000308911 1335 ntBASIC15.83■□□□□ 0.12
NKX2-2O95096 TUBB7P-202ENST00000428444 1305 ntBASIC15.83■□□□□ 0.12
NKX2-2O95096 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX2-2O95096 TUBB8P7-204ENST00000567960 1332 ntBASIC15.83■□□□□ 0.12
NKX2-2O95096 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.83■□□□□ 0.12
NKX2-2O95096 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NKX2-2O95096 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX2-2O95096 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX2-2O95096 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.83■□□□□ 0.12
NKX2-2O95096 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-2O95096 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX2-2O95096 AC106886.4-201ENST00000623557 2502 ntBASIC15.83■□□□□ 0.12
NKX2-2O95096 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
NKX2-2O95096 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
NKX2-2O95096 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NKX2-2O95096 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-2O95096 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.82■□□□□ 0.12
NKX2-2O95096 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms