Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SOX30O94993 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
SOX30O94993 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX30O94993 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SOX30O94993 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
SOX30O94993 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SOX30O94993 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SOX30O94993 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
SOX30O94993 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SOX30O94993 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SOX30O94993 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX30O94993 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.03■□□□□ 0.16
SOX30O94993 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SOX30O94993 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SOX30O94993 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 AP002490.2-201ENST00000524791 560 ntBASIC16.03■□□□□ 0.16
SOX30O94993 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.03■□□□□ 0.16
SOX30O94993 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX30O94993 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.03■□□□□ 0.16
SOX30O94993 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX30O94993 AL691432.3-201ENST00000621860 400 ntBASIC16.03■□□□□ 0.16
SOX30O94993 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SOX30O94993 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX30O94993 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX30O94993 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SOX30O94993 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SOX30O94993 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX30O94993 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX30O94993 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.03■□□□□ 0.16
SOX30O94993 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
SOX30O94993 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX30O94993 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SOX30O94993 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.02■□□□□ 0.16
SOX30O94993 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.02■□□□□ 0.16
SOX30O94993 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SOX30O94993 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 SLC25A1P3-201ENST00000395415 828 ntBASIC16.02■□□□□ 0.16
SOX30O94993 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.02■□□□□ 0.16
SOX30O94993 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.02■□□□□ 0.16
SOX30O94993 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.02■□□□□ 0.16
SOX30O94993 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.02■□□□□ 0.16
SOX30O94993 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 AL139288.1-201ENST00000623748 933 ntBASIC16.02■□□□□ 0.16
SOX30O94993 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX30O94993 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
SOX30O94993 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX30O94993 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SOX30O94993 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SOX30O94993 AC022211.2-201ENST00000585075 2527 ntBASIC16.02■□□□□ 0.15
SOX30O94993 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
SOX30O94993 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SOX30O94993 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX30O94993 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SOX30O94993 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX30O94993 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX30O94993 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX30O94993 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX30O94993 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.01■□□□□ 0.15
SOX30O94993 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SOX30O94993 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX30O94993 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX30O94993 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
SOX30O94993 AC132008.2-207ENST00000454517 770 ntBASIC16.01■□□□□ 0.15
SOX30O94993 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX30O94993 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms