Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GPC4O75487 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC4O75487 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GPC4O75487 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.28■□□□□ 0.36
GPC4O75487 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC4O75487 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC4O75487 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC4O75487 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GPC4O75487 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GPC4O75487 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC4O75487 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC4O75487 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC4O75487 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GPC4O75487 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GPC4O75487 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC4O75487 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
GPC4O75487 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC4O75487 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC4O75487 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC4O75487 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GPC4O75487 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GPC4O75487 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC4O75487 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC4O75487 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC4O75487 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC4O75487 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC4O75487 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC4O75487 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC4O75487 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC4O75487 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GPC4O75487 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.27■□□□□ 0.36
GPC4O75487 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC4O75487 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.27■□□□□ 0.36
GPC4O75487 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.27■□□□□ 0.36
GPC4O75487 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.27■□□□□ 0.36
GPC4O75487 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.27■□□□□ 0.36
GPC4O75487 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.27■□□□□ 0.36
GPC4O75487 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC4O75487 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC4O75487 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC4O75487 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC4O75487 TNRC18P3-201ENST00000441896 2691 ntBASIC17.27■□□□□ 0.35
GPC4O75487 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC4O75487 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
GPC4O75487 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC4O75487 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
GPC4O75487 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC4O75487 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC4O75487 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC4O75487 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GPC4O75487 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
GPC4O75487 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.26■□□□□ 0.35
GPC4O75487 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GPC4O75487 KRT16P4-201ENST00000453883 522 ntBASIC17.26■□□□□ 0.35
GPC4O75487 MIR5100-201ENST00000579544 119 ntBASIC17.26■□□□□ 0.35
GPC4O75487 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.26■□□□□ 0.35
GPC4O75487 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GPC4O75487 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GPC4O75487 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GPC4O75487 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GPC4O75487 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.26■□□□□ 0.35
GPC4O75487 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC4O75487 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC4O75487 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC4O75487 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GPC4O75487 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.25■□□□□ 0.35
GPC4O75487 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC4O75487 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.25■□□□□ 0.35
GPC4O75487 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPC4O75487 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
GPC4O75487 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.25■□□□□ 0.35
GPC4O75487 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms