Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 AC063952.2-201ENST00000498792 1227 ntBASIC15.29■□□□□ 0.04
ZNF254O75437 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF254O75437 AC124947.2-201ENST00000547118 1133 ntBASIC15.29■□□□□ 0.04
ZNF254O75437 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF254O75437 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF254O75437 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF254O75437 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF254O75437 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF254O75437 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
ZNF254O75437 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.29■□□□□ 0.04
ZNF254O75437 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF254O75437 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF254O75437 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ZNF254O75437 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ZNF254O75437 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ZNF254O75437 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ZNF254O75437 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF254O75437 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ZNF254O75437 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF254O75437 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF254O75437 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ZNF254O75437 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF254O75437 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
ZNF254O75437 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
ZNF254O75437 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ZNF254O75437 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 FAM220CP-201ENST00000395253 831 ntBASIC15.28■□□□□ 0.04
ZNF254O75437 AL645929.1-201ENST00000420084 975 ntBASIC15.28■□□□□ 0.04
ZNF254O75437 SPDYE13P-201ENST00000445314 798 ntBASIC15.28■□□□□ 0.04
ZNF254O75437 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ZNF254O75437 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.28■□□□□ 0.04
ZNF254O75437 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF254O75437 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.28■□□□□ 0.04
ZNF254O75437 AC083849.1-201ENST00000615227 514 ntBASIC15.28■□□□□ 0.04
ZNF254O75437 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF254O75437 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF254O75437 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF254O75437 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF254O75437 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF254O75437 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF254O75437 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ZNF254O75437 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF254O75437 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
ZNF254O75437 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF254O75437 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
ZNF254O75437 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF254O75437 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ZNF254O75437 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF254O75437 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ZNF254O75437 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF254O75437 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF254O75437 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms