Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.71■□□□□ 0.43
TSPAN3O60637 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TSPAN3O60637 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.71■□□□□ 0.43
TSPAN3O60637 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.71■□□□□ 0.43
TSPAN3O60637 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TSPAN3O60637 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
TSPAN3O60637 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.71■□□□□ 0.43
TSPAN3O60637 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.71■□□□□ 0.43
TSPAN3O60637 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TSPAN3O60637 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.71■□□□□ 0.43
TSPAN3O60637 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.71■□□□□ 0.43
TSPAN3O60637 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.71■□□□□ 0.43
TSPAN3O60637 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.71■□□□□ 0.43
TSPAN3O60637 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.71■□□□□ 0.43
TSPAN3O60637 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TSPAN3O60637 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN3O60637 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.71■□□□□ 0.42
TSPAN3O60637 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TSPAN3O60637 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.71■□□□□ 0.42
TSPAN3O60637 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TSPAN3O60637 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.7■□□□□ 0.42
TSPAN3O60637 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
TSPAN3O60637 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TSPAN3O60637 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.7■□□□□ 0.42
TSPAN3O60637 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TSPAN3O60637 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TSPAN3O60637 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TSPAN3O60637 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 PRSS29P-201ENST00000440800 595 ntBASIC17.7■□□□□ 0.42
TSPAN3O60637 HCG4B-203ENST00000450128 991 ntBASIC17.7■□□□□ 0.42
TSPAN3O60637 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.7■□□□□ 0.42
TSPAN3O60637 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.7■□□□□ 0.42
TSPAN3O60637 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.7■□□□□ 0.42
TSPAN3O60637 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
TSPAN3O60637 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.7■□□□□ 0.42
TSPAN3O60637 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.7■□□□□ 0.42
TSPAN3O60637 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.7■□□□□ 0.42
TSPAN3O60637 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.7■□□□□ 0.42
TSPAN3O60637 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.7■□□□□ 0.42
TSPAN3O60637 OR7E47P-204ENST00000575924 449 ntBASIC17.7■□□□□ 0.42
TSPAN3O60637 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TSPAN3O60637 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TSPAN3O60637 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.7■□□□□ 0.42
TSPAN3O60637 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TSPAN3O60637 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN3O60637 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TSPAN3O60637 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TSPAN3O60637 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.69■□□□□ 0.42
TSPAN3O60637 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 IGLL3P-201ENST00000412472 434 ntBASIC17.69■□□□□ 0.42
TSPAN3O60637 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.69■□□□□ 0.42
TSPAN3O60637 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.69■□□□□ 0.42
TSPAN3O60637 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.69■□□□□ 0.42
TSPAN3O60637 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TSPAN3O60637 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.69■□□□□ 0.42
TSPAN3O60637 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.69■□□□□ 0.42
TSPAN3O60637 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.69■□□□□ 0.42
TSPAN3O60637 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.69■□□□□ 0.42
TSPAN3O60637 AC010654.1-201ENST00000615722 808 ntBASIC17.69■□□□□ 0.42
TSPAN3O60637 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.69■□□□□ 0.42
TSPAN3O60637 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.69■□□□□ 0.42
TSPAN3O60637 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN3O60637 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TSPAN3O60637 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms