Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SSSCA1O60232 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 AC092364.2-201ENST00000596710 2692 ntBASIC14.08□□□□□ -0.16
SSSCA1O60232 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SSSCA1O60232 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.07□□□□□ -0.16
SSSCA1O60232 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SSSCA1O60232 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.07□□□□□ -0.16
SSSCA1O60232 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.07□□□□□ -0.16
SSSCA1O60232 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SSSCA1O60232 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.07□□□□□ -0.16
SSSCA1O60232 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 AC112698.1-201ENST00000510299 916 ntBASIC14.07□□□□□ -0.16
SSSCA1O60232 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.07□□□□□ -0.16
SSSCA1O60232 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.07□□□□□ -0.16
SSSCA1O60232 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 AC026471.5-201ENST00000615068 467 ntBASIC14.07□□□□□ -0.16
SSSCA1O60232 AL157888.1-201ENST00000631930 593 ntBASIC14.07□□□□□ -0.16
SSSCA1O60232 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.07□□□□□ -0.16
SSSCA1O60232 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.07□□□□□ -0.16
SSSCA1O60232 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSSCA1O60232 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.06□□□□□ -0.16
SSSCA1O60232 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SSSCA1O60232 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.06□□□□□ -0.16
SSSCA1O60232 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SSSCA1O60232 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 UNC93B2-201ENST00000285383 730 ntBASIC14.06□□□□□ -0.16
SSSCA1O60232 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 RPS2P55-201ENST00000397318 883 ntBASIC14.06□□□□□ -0.16
SSSCA1O60232 MIR935-201ENST00000401179 91 ntBASIC14.06□□□□□ -0.16
SSSCA1O60232 AC107956.1-201ENST00000494359 873 ntBASIC14.06□□□□□ -0.16
SSSCA1O60232 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.06□□□□□ -0.16
SSSCA1O60232 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.06□□□□□ -0.16
SSSCA1O60232 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.06□□□□□ -0.16
SSSCA1O60232 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SSSCA1O60232 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.06□□□□□ -0.16
SSSCA1O60232 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SSSCA1O60232 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 KRT8P9-201ENST00000558927 1449 ntBASIC14.06□□□□□ -0.16
SSSCA1O60232 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SSSCA1O60232 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms