Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 AC092053.1-201ENST00000605787 1936 ntBASIC16.48■□□□□ 0.23
PRICKLE3O43900 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.47■□□□□ 0.23
PRICKLE3O43900 PRSS29P-201ENST00000440800 595 ntBASIC16.47■□□□□ 0.23
PRICKLE3O43900 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.47■□□□□ 0.23
PRICKLE3O43900 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE3O43900 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 AL671883.3-201ENST00000603274 991 ntBASIC16.46■□□□□ 0.23
PRICKLE3O43900 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRICKLE3O43900 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE3O43900 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRICKLE3O43900 AP001094.4-201ENST00000579008 2176 ntBASIC16.45■□□□□ 0.22
PRICKLE3O43900 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRICKLE3O43900 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRICKLE3O43900 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PRICKLE3O43900 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRICKLE3O43900 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRICKLE3O43900 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRICKLE3O43900 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.45■□□□□ 0.22
PRICKLE3O43900 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRICKLE3O43900 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRICKLE3O43900 MIR574-201ENST00000385209 96 ntBASIC16.45■□□□□ 0.22
PRICKLE3O43900 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.45■□□□□ 0.22
PRICKLE3O43900 MRPL20P1-201ENST00000400819 433 ntBASIC16.45■□□□□ 0.22
PRICKLE3O43900 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRICKLE3O43900 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.45■□□□□ 0.22
PRICKLE3O43900 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.45■□□□□ 0.22
PRICKLE3O43900 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.45■□□□□ 0.22
PRICKLE3O43900 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.45■□□□□ 0.22
PRICKLE3O43900 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.45■□□□□ 0.22
PRICKLE3O43900 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms