Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC28A2O43868 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC28A2O43868 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC28A2O43868 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC28A2O43868 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC28A2O43868 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC28A2O43868 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC28A2O43868 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC28A2O43868 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC28A2O43868 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC28A2O43868 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC28A2O43868 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC28A2O43868 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC28A2O43868 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC28A2O43868 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC28A2O43868 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC28A2O43868 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC28A2O43868 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SLC28A2O43868 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SLC28A2O43868 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC28A2O43868 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC28A2O43868 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A2O43868 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A2O43868 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC28A2O43868 DDX43P3-201ENST00000441064 443 ntBASIC16.59■□□□□ 0.25
SLC28A2O43868 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC28A2O43868 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A2O43868 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A2O43868 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC28A2O43868 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SLC28A2O43868 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC28A2O43868 AC012640.2-201ENST00000561606 901 ntBASIC16.59■□□□□ 0.25
SLC28A2O43868 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC28A2O43868 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A2O43868 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SLC28A2O43868 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC28A2O43868 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
SLC28A2O43868 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SLC28A2O43868 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC28A2O43868 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC28A2O43868 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC28A2O43868 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC28A2O43868 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC28A2O43868 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A2O43868 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC28A2O43868 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A2O43868 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SLC28A2O43868 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.58■□□□□ 0.25
SLC28A2O43868 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC28A2O43868 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A2O43868 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC28A2O43868 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SLC28A2O43868 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC28A2O43868 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC28A2O43868 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A2O43868 PAWRP1-201ENST00000451083 565 ntBASIC16.58■□□□□ 0.24
SLC28A2O43868 HLA-J-202ENST00000469281 1241 ntBASIC16.58■□□□□ 0.24
SLC28A2O43868 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
SLC28A2O43868 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A2O43868 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A2O43868 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.58■□□□□ 0.24
SLC28A2O43868 AC005336.2-201ENST00000593183 939 ntBASIC16.58■□□□□ 0.24
SLC28A2O43868 AC009154.2-201ENST00000621177 724 ntBASIC16.58■□□□□ 0.24
SLC28A2O43868 LINC01451-201ENST00000623792 534 ntBASIC16.58■□□□□ 0.24
SLC28A2O43868 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC28A2O43868 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC28A2O43868 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC28A2O43868 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A2O43868 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms