Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC141586.5-201ENST00000624546 2050 ntBASIC16.2■□□□□ 0.18
CLDN4O14493 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN4O14493 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 AC079776.4-201ENST00000511039 504 ntBASIC16.2■□□□□ 0.18
CLDN4O14493 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN4O14493 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN4O14493 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN4O14493 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN4O14493 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN4O14493 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN4O14493 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN4O14493 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN4O14493 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN4O14493 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN4O14493 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 AC005593.1-201ENST00000624894 515 ntBASIC16.2■□□□□ 0.18
CLDN4O14493 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN4O14493 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN4O14493 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN4O14493 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN4O14493 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN4O14493 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLDN4O14493 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CLDN4O14493 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN4O14493 KRT18P27-201ENST00000427733 1299 ntBASIC16.19■□□□□ 0.18
CLDN4O14493 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN4O14493 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN4O14493 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN4O14493 AL356488.2-201ENST00000602755 427 ntBASIC16.19■□□□□ 0.18
CLDN4O14493 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN4O14493 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLDN4O14493 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN4O14493 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN4O14493 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN4O14493 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN4O14493 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN4O14493 AL590787.1-201ENST00000568856 1315 ntBASIC16.19■□□□□ 0.18
CLDN4O14493 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN4O14493 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.18■□□□□ 0.18
CLDN4O14493 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 EGFEM1P-202ENST00000431685 1563 ntBASIC16.18■□□□□ 0.18
CLDN4O14493 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN4O14493 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN4O14493 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms