Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN5O00501 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN5O00501 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN5O00501 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN5O00501 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN5O00501 AC092053.1-201ENST00000605787 1936 ntBASIC18.1■□□□□ 0.49
CLDN5O00501 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN5O00501 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN5O00501 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN5O00501 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN5O00501 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 AC108860.2-201ENST00000562760 2183 ntBASIC18.09■□□□□ 0.49
CLDN5O00501 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
CLDN5O00501 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLDN5O00501 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN5O00501 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLDN5O00501 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 AL023806.1-201ENST00000603994 1649 ntBASIC18.09■□□□□ 0.49
CLDN5O00501 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN5O00501 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN5O00501 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN5O00501 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN5O00501 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN5O00501 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN5O00501 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN5O00501 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.08■□□□□ 0.49
CLDN5O00501 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN5O00501 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN5O00501 AC002310.6-201ENST00000624451 1377 ntBASIC18.08■□□□□ 0.49
CLDN5O00501 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN5O00501 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN5O00501 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN5O00501 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN5O00501 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN5O00501 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CLDN5O00501 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN5O00501 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
CLDN5O00501 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN5O00501 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN5O00501 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.08■□□□□ 0.48
CLDN5O00501 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN5O00501 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN5O00501 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN5O00501 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN5O00501 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLDN5O00501 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.08■□□□□ 0.48
CLDN5O00501 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN5O00501 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.08■□□□□ 0.48
CLDN5O00501 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN5O00501 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLDN5O00501 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN5O00501 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN5O00501 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLDN5O00501 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLDN5O00501 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN5O00501 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLDN5O00501 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN5O00501 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN5O00501 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.07■□□□□ 0.48
CLDN5O00501 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CLDN5O00501 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN5O00501 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.07■□□□□ 0.48
CLDN5O00501 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN5O00501 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 AC023511.2-201ENST00000618803 211 ntBASIC18.07■□□□□ 0.48
CLDN5O00501 AC010507.1-201ENST00000633895 436 ntBASIC18.07■□□□□ 0.48
CLDN5O00501 AC092865.6-201ENST00000642101 219 ntBASIC18.07■□□□□ 0.48
CLDN5O00501 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN5O00501 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN5O00501 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLDN5O00501 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN5O00501 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN5O00501 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms