Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX39AO00148 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX39AO00148 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX39AO00148 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
DDX39AO00148 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX39AO00148 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX39AO00148 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX39AO00148 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
DDX39AO00148 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX39AO00148 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX39AO00148 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
DDX39AO00148 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
DDX39AO00148 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DDX39AO00148 IGLL3P-201ENST00000412472 434 ntBASIC19.32■□□□□ 0.68
DDX39AO00148 BX842568.4-201ENST00000421222 227 ntBASIC19.32■□□□□ 0.68
DDX39AO00148 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX39AO00148 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
DDX39AO00148 HCG4B-203ENST00000450128 991 ntBASIC19.32■□□□□ 0.68
DDX39AO00148 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.32■□□□□ 0.68
DDX39AO00148 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX39AO00148 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX39AO00148 AC010654.1-201ENST00000615722 808 ntBASIC19.32■□□□□ 0.68
DDX39AO00148 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX39AO00148 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
DDX39AO00148 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DDX39AO00148 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX39AO00148 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX39AO00148 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX39AO00148 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
DDX39AO00148 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX39AO00148 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
DDX39AO00148 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX39AO00148 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
DDX39AO00148 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
DDX39AO00148 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
DDX39AO00148 KRT18P13-201ENST00000400056 1290 ntBASIC19.31■□□□□ 0.68
DDX39AO00148 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
DDX39AO00148 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDX39AO00148 PRSS29P-201ENST00000440800 595 ntBASIC19.31■□□□□ 0.68
DDX39AO00148 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.31■□□□□ 0.68
DDX39AO00148 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX39AO00148 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX39AO00148 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
DDX39AO00148 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX39AO00148 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX39AO00148 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
DDX39AO00148 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.31■□□□□ 0.68
DDX39AO00148 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX39AO00148 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 AC093525.9-201ENST00000624961 1746 ntBASIC19.31■□□□□ 0.68
DDX39AO00148 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX39AO00148 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 PCDHB18P-201ENST00000524813 2368 ntBASIC19.3■□□□□ 0.68
DDX39AO00148 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.3■□□□□ 0.68
DDX39AO00148 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX39AO00148 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX39AO00148 SLC25A1P3-201ENST00000395415 828 ntBASIC19.3■□□□□ 0.68
DDX39AO00148 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX39AO00148 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX39AO00148 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.3■□□□□ 0.68
DDX39AO00148 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
DDX39AO00148 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
DDX39AO00148 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
DDX39AO00148 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
DDX39AO00148 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX39AO00148 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX39AO00148 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX39AO00148 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.29■□□□□ 0.68
DDX39AO00148 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.29■□□□□ 0.68
DDX39AO00148 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
DDX39AO00148 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DDX39AO00148 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms