Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 MIR3687-2-201ENST00000577708 61 ntBASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 MIR4751-201ENST00000578027 74 ntBASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 MIR3687-1-201ENST00000614492 61 ntBASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NPIPA2E9PIF3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 AC009336.1-201ENST00000608941 1553 ntBASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 YBX2P1-201ENST00000394192 760 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms