Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 AL096828.2-201ENST00000567259 1965 ntBASIC16.9■□□□□ 0.3
VGLL3A8MV65 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VGLL3A8MV65 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VGLL3A8MV65 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 AC013268.1-206ENST00000638368 961 ntBASIC16.89■□□□□ 0.29
VGLL3A8MV65 AC112229.1-201ENST00000639295 961 ntBASIC16.89■□□□□ 0.29
VGLL3A8MV65 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.89■□□□□ 0.29
VGLL3A8MV65 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 CICP11-201ENST00000434745 2827 ntBASIC16.89■□□□□ 0.29
VGLL3A8MV65 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
VGLL3A8MV65 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL3A8MV65 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 AC007322.1-201ENST00000426983 750 ntBASIC16.88■□□□□ 0.29
VGLL3A8MV65 AC007322.4-201ENST00000509611 723 ntBASIC16.88■□□□□ 0.29
VGLL3A8MV65 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VGLL3A8MV65 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL3A8MV65 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL3A8MV65 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL3A8MV65 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms