Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 ELK1P1-201ENST00000485699 580 ntBASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM88BA6NKF7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM88BA6NKF7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 BRWD1P1-201ENST00000401091 371 ntBASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 AL080243.2-201ENST00000418783 582 ntBASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 RN7SL618P-201ENST00000477850 296 ntBASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 SPDYE18-201ENST00000510091 1050 ntBASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 AL079307.3-201ENST00000556114 283 ntBASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 RN7SL190P-201ENST00000582519 257 ntBASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88BA6NKF7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms