Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 SAPCD2P3-201ENST00000455031 850 ntBASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 AC092171.3-201ENST00000610122 2651 ntBASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 AC078925.2-201ENST00000624013 1973 ntBASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 PCDH8P1-201ENST00000428983 2773 ntBASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 AC004870.1-201ENST00000315132 882 ntBASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 ABCD1P5-201ENST00000445663 754 ntBASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 IGHV3-52-201ENST00000519770 353 ntBASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 AC109462.3-201ENST00000573934 613 ntBASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEF25A6NGN4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 AKR1C7P-201ENST00000305623 895 ntBASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 RN7SL510P-201ENST00000581311 263 ntBASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 AP001269.4-201ENST00000609611 512 ntBASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEF25A6NGN4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms