Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AC105339.1-204ENST00000636249 355 ntBASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 AC133963.1-201ENST00000504166 1679 ntBASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 AC004461.1-201ENST00000412461 403 ntBASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 TSEN15P1-201ENST00000423257 515 ntBASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 AC004449.1-201ENST00000564240 433 ntBASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 AC106028.4-201ENST00000614509 607 ntBASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 AL513210.1-201ENST00000629608 234 ntBASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 AL645728.2-201ENST00000641974 660 ntBASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3BA6NDS4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.39■□□□□ 0.38
TBC1D3BA6NDS4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TBC1D3BA6NDS4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TBC1D3BA6NDS4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TBC1D3BA6NDS4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TBC1D3BA6NDS4 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 AL121761.2-201ENST00000598007 1648 ntBASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TBC1D3BA6NDS4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms