Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SBNO1A3KN83 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SBNO1A3KN83 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SBNO1A3KN83 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC23.05■■□□□ 1.28
SBNO1A3KN83 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC23.05■■□□□ 1.28
SBNO1A3KN83 AC142381.1-201ENST00000426099 345 ntBASIC23.05■■□□□ 1.28
SBNO1A3KN83 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 TMPRSS11CP-201ENST00000453277 683 ntBASIC23.05■■□□□ 1.28
SBNO1A3KN83 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC23.05■■□□□ 1.28
SBNO1A3KN83 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
SBNO1A3KN83 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SBNO1A3KN83 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC23.05■■□□□ 1.28
SBNO1A3KN83 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SBNO1A3KN83 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SBNO1A3KN83 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SBNO1A3KN83 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC23.04■■□□□ 1.28
SBNO1A3KN83 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SBNO1A3KN83 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SBNO1A3KN83 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SBNO1A3KN83 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SBNO1A3KN83 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC23.04■■□□□ 1.28
SBNO1A3KN83 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC23.04■■□□□ 1.28
SBNO1A3KN83 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SBNO1A3KN83 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC23.04■■□□□ 1.28
SBNO1A3KN83 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
SBNO1A3KN83 CU639417.3-201ENST00000624240 1404 ntBASIC23.04■■□□□ 1.28
SBNO1A3KN83 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SBNO1A3KN83 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SBNO1A3KN83 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SBNO1A3KN83 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SBNO1A3KN83 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.04■■□□□ 1.28
SBNO1A3KN83 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
SBNO1A3KN83 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SBNO1A3KN83 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SBNO1A3KN83 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SBNO1A3KN83 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SBNO1A3KN83 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SBNO1A3KN83 SLC25A6P5-201ENST00000435663 894 ntBASIC23.03■■□□□ 1.28
SBNO1A3KN83 AC027369.6-201ENST00000525520 931 ntBASIC23.03■■□□□ 1.28
SBNO1A3KN83 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 AC091167.2-201ENST00000579581 588 ntBASIC23.03■■□□□ 1.28
SBNO1A3KN83 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SBNO1A3KN83 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 SLC22A20-204ENST00000530038 1673 ntBASIC23.03■■□□□ 1.28
SBNO1A3KN83 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SBNO1A3KN83 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SBNO1A3KN83 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC23.03■■□□□ 1.28
SBNO1A3KN83 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 AC016027.1-202ENST00000607927 1699 ntBASIC23.02■■□□□ 1.28
SBNO1A3KN83 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 U91328.1-201ENST00000437528 223 ntBASIC23.02■■□□□ 1.28
SBNO1A3KN83 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC23.02■■□□□ 1.28
SBNO1A3KN83 AC007967.4-201ENST00000614700 386 ntBASIC23.02■■□□□ 1.28
SBNO1A3KN83 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
SBNO1A3KN83 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
SBNO1A3KN83 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC23.02■■□□□ 1.28
SBNO1A3KN83 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
SBNO1A3KN83 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SBNO1A3KN83 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SBNO1A3KN83 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SBNO1A3KN83 ARSEP1-201ENST00000420443 635 ntBASIC23.01■■□□□ 1.27
SBNO1A3KN83 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SBNO1A3KN83 AC009477.1-201ENST00000452936 217 ntBASIC23.01■■□□□ 1.27
SBNO1A3KN83 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC23.01■■□□□ 1.27
SBNO1A3KN83 AL138828.2-201ENST00000615812 383 ntBASIC23.01■■□□□ 1.27
SBNO1A3KN83 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SBNO1A3KN83 AC135050.7-201ENST00000624508 2218 ntBASIC23.01■■□□□ 1.27
SBNO1A3KN83 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SBNO1A3KN83 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC23.01■■□□□ 1.27
SBNO1A3KN83 NME9-203ENST00000383180 2133 ntTSL 2 BASIC23.01■■□□□ 1.27
SBNO1A3KN83 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SBNO1A3KN83 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC23.01■■□□□ 1.27
SBNO1A3KN83 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC23.01■■□□□ 1.27
SBNO1A3KN83 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC23.01■■□□□ 1.27
SBNO1A3KN83 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms