Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AC087641.1-201ENST00000557561 1021 ntBASIC24.49■■□□□ 1.51
CCDC144AA2RUR9 KRT8P49-201ENST00000604166 1432 ntBASIC24.49■■□□□ 1.51
CCDC144AA2RUR9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144AA2RUR9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC144AA2RUR9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144AA2RUR9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 AC069335.1-201ENST00000489972 472 ntBASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 AC131009.4-201ENST00000624048 1740 ntBASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144AA2RUR9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 AC067852.2-201ENST00000590513 2313 ntBASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CCDC144AA2RUR9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 MPDU1-223ENST00000582151 728 ntBASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 LINC00628-201ENST00000628516 1289 ntBASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 LINC02012-201ENST00000608206 1725 ntBASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC144AA2RUR9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 KRT18P32-201ENST00000424695 1287 ntBASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 SPCS2P4-201ENST00000436160 681 ntBASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 AC124947.2-201ENST00000547118 1133 ntBASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CCDC144AA2RUR9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC144AA2RUR9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CCDC144AA2RUR9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CCDC144AA2RUR9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC24.45■■□□□ 1.5
CCDC144AA2RUR9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC24.45■■□□□ 1.5
CCDC144AA2RUR9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC144AA2RUR9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CCDC144AA2RUR9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC24.45■■□□□ 1.5
CCDC144AA2RUR9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC24.44■■□□□ 1.5
CCDC144AA2RUR9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms