Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 KRT8P32-201ENST00000512863 1461 ntBASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 SLC9A3P3-201ENST00000457608 2229 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AC117489.1-201ENST00000625169 3217 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AC027612.1-201ENST00000445234 2395 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 LINC00552-201ENST00000625151 2579 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AC010491.1-201ENST00000563101 2797 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AC105265.2-201ENST00000467189 838 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 CDV3P1-201ENST00000471403 739 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 BHLHE23-202ENST00000612929 1109 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AL358852.1-201ENST00000623174 1268 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AC006504.5-208ENST00000588784 2401 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 CICP17-201ENST00000418553 2377 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 AL109954.1-202ENST00000564051 2148 ntBASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LINC01558Q9Y6Z2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms