Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 AC006449.5-201ENST00000610658 2098 ntBASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 AC026691.1-201ENST00000602502 2017 ntBASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 AC010653.2-201ENST00000623505 997 ntBASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCNIP3Q9Y2W7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 AC079328.2-201ENST00000561241 3354 ntBASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 AC007663.1-201ENST00000438948 1240 ntBASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 AL359736.2-201ENST00000621992 437 ntBASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 CYP2T1P-202ENST00000641596 2535 ntBASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCNIP3Q9Y2W7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms