Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PCDHA12-202ENST00000613593 2588 ntBASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 AD000864.1-201ENST00000624076 2295 ntBASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 EMBP1-201ENST00000458200 901 ntBASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 AC124947.2-201ENST00000547118 1133 ntBASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 MTDHP4-201ENST00000600287 670 ntBASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4E1Q9UPM8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 PRORSD1P-202ENST00000563365 2154 ntBASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 AL353135.1-201ENST00000606729 504 ntBASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4E1Q9UPM8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 AC021087.4-201ENST00000563761 564 ntBASIC17.84■□□□□ 0.45
AP4E1Q9UPM8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms