Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 AL355994.1-201ENST00000424379 260 ntBASIC16.3■□□□□ 0.2
LHX6Q9UPM6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 AC069335.1-201ENST00000489972 472 ntBASIC16.3■□□□□ 0.2
LHX6Q9UPM6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 SERBP1P5-201ENST00000510079 1181 ntBASIC16.3■□□□□ 0.2
LHX6Q9UPM6 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 AL512356.2-201ENST00000546955 174 ntBASIC16.3■□□□□ 0.2
LHX6Q9UPM6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 AP000997.3-201ENST00000623333 2250 ntBASIC16.3■□□□□ 0.2
LHX6Q9UPM6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX6Q9UPM6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 NCF1C-201ENST00000438382 1427 ntBASIC16.29■□□□□ 0.2
LHX6Q9UPM6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AC112191.1-201ENST00000523689 701 ntBASIC16.29■□□□□ 0.2
LHX6Q9UPM6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX6Q9UPM6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX6Q9UPM6 AC007967.3-201ENST00000434308 558 ntBASIC16.28■□□□□ 0.2
LHX6Q9UPM6 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms