Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 AC124067.4-201ENST00000519691 2379 ntBASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC6Q9UBN7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 MCCD1P2-201ENST00000423228 335 ntBASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 PMS2P2-201ENST00000425039 1128 ntBASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 VN2R19P-201ENST00000442399 1052 ntBASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 DNAJB3-202ENST00000449667 1266 ntBASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 IGHV3-65-201ENST00000523210 341 ntBASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 MIR4751-201ENST00000578027 74 ntBASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 AC092865.6-201ENST00000642101 219 ntBASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.46■□□□□ 0.71
HDAC6Q9UBN7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 AC018845.2-201ENST00000568326 409 ntBASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 AC008667.4-201ENST00000607370 168 ntBASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 AC116407.2-201ENST00000613639 860 ntBASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 AC004790.2-201ENST00000623588 572 ntBASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC6Q9UBN7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 AC211486.1-202ENST00000416371 468 ntBASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 HCG4B-203ENST00000450128 991 ntBASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 AC211476.1-201ENST00000503899 468 ntBASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 STK19B-204ENST00000512515 211 ntBASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 STK25P1-201ENST00000585406 838 ntBASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 BX276092.7-203ENST00000637198 1536 ntBASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 TNRC18P3-201ENST00000441896 2691 ntBASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms