Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC10Q9NYD6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC10Q9NYD6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC10Q9NYD6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC10Q9NYD6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC10Q9NYD6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 HCG4-201ENST00000418983 998 ntBASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 AC109635.5-201ENST00000533593 962 ntBASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 Z92544.3-201ENST00000624747 417 ntBASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC10Q9NYD6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 KRT18P32-201ENST00000424695 1287 ntBASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 FAM58DP-201ENST00000428076 619 ntBASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 RNA5SP421-201ENST00000516864 134 ntBASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 KRT8P23-201ENST00000560090 1207 ntBASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 AC005498.2-205ENST00000593218 784 ntBASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 AP001059.3-201ENST00000619053 235 ntBASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC10Q9NYD6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 SPCS2P4-201ENST00000436160 681 ntBASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 CNN2P2-201ENST00000443536 909 ntBASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 CNN2P3-201ENST00000450201 906 ntBASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 IGHV3-62-201ENST00000520057 340 ntBASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 AC016396.2-201ENST00000562575 1417 ntBASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 LINC01225-203ENST00000563550 1244 ntBASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 AL136317.3-201ENST00000618497 906 ntBASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC10Q9NYD6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms