Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 CROCCP2-202ENST00000412962 2773 ntBASIC20.62■□□□□ 0.89
SALL1Q9NSC2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 EGFEM1P-202ENST00000431685 1563 ntBASIC20.62■□□□□ 0.89
SALL1Q9NSC2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 AP000344.2-201ENST00000512987 629 ntBASIC20.61■□□□□ 0.89
SALL1Q9NSC2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SALL1Q9NSC2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 AL513210.1-201ENST00000629608 234 ntBASIC20.6■□□□□ 0.89
SALL1Q9NSC2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL1Q9NSC2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 KRT18P28-201ENST00000453838 1332 ntBASIC20.59■□□□□ 0.89
SALL1Q9NSC2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 AC140658.5-201ENST00000438532 169 ntBASIC20.59■□□□□ 0.89
SALL1Q9NSC2 AC112191.1-201ENST00000523689 701 ntBASIC20.59■□□□□ 0.89
SALL1Q9NSC2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 LTB4R2-202ENST00000528054 3092 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms