Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 FLJ13224-201ENST00000313737 1514 ntBASIC17.81■□□□□ 0.44
HPS4Q9NQG7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.8■□□□□ 0.44
HPS4Q9NQG7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 ABALON-201ENST00000629058 1903 ntBASIC17.79■□□□□ 0.44
HPS4Q9NQG7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HPS4Q9NQG7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HPS4Q9NQG7 FAM58CP-201ENST00000435741 640 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms