Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NLRC4Q9NPP4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 KLF4P1-201ENST00000412782 1185 ntBASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 AD001527.2-201ENST00000622994 785 ntBASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 AC092171.3-201ENST00000610122 2651 ntBASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NLRC4Q9NPP4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 DRAXINP1-201ENST00000437611 948 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 FAM210CP-201ENST00000445714 574 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 LINC00265-3P-201ENST00000447588 903 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 MINOS1P3-201ENST00000457048 203 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 AC096582.2-201ENST00000510860 516 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 BNIP3P18-201ENST00000593976 575 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 Z69720.1-201ENST00000601483 472 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 AC073592.5-201ENST00000624854 528 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 IER3-202ENST00000376377 1350 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 PCDHB19P-201ENST00000570871 2371 ntBASIC18.67■□□□□ 0.58
NLRC4Q9NPP4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 AC078925.2-201ENST00000624013 1973 ntBASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 NSUN5P1-202ENST00000421140 1535 ntBASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 NSUN5P2-203ENST00000457352 1529 ntBASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 AC003669.1-201ENST00000334569 611 ntBASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 KRT17P6-201ENST00000453795 1220 ntBASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRC4Q9NPP4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms