Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 AC016396.2-201ENST00000562575 1417 ntBASIC15.97■□□□□ 0.15
UBQLN3Q9H347 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 AC073648.2-201ENST00000510116 352 ntBASIC15.97■□□□□ 0.15
UBQLN3Q9H347 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 AC021087.4-201ENST00000563761 564 ntBASIC15.97■□□□□ 0.15
UBQLN3Q9H347 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 NKAPP1-205ENST00000585790 367 ntBASIC15.97■□□□□ 0.15
UBQLN3Q9H347 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 LYSMD4-203ENST00000378904 2122 ntBASIC15.97■□□□□ 0.15
UBQLN3Q9H347 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBQLN3Q9H347 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 SPDYE21P-201ENST00000413323 827 ntBASIC15.96■□□□□ 0.15
UBQLN3Q9H347 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 AC073592.5-201ENST00000624854 528 ntBASIC15.96■□□□□ 0.15
UBQLN3Q9H347 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
UBQLN3Q9H347 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.96■□□□□ 0.14
UBQLN3Q9H347 AC132938.5-201ENST00000624980 1813 ntBASIC15.96■□□□□ 0.14
UBQLN3Q9H347 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
UBQLN3Q9H347 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.96■□□□□ 0.14
UBQLN3Q9H347 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.96■□□□□ 0.14
UBQLN3Q9H347 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
UBQLN3Q9H347 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
UBQLN3Q9H347 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
UBQLN3Q9H347 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.95■□□□□ 0.14
UBQLN3Q9H347 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBQLN3Q9H347 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
UBQLN3Q9H347 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
UBQLN3Q9H347 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBQLN3Q9H347 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms