Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AC007950.2-201ENST00000615045 2347 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 POM121L13P-201ENST00000422362 380 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 KRT18P5-201ENST00000436075 1291 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 DDX43P3-201ENST00000441064 443 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MIR4758-201ENST00000577688 71 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MIR3180-5-201ENST00000583743 153 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AL050303.2-201ENST00000619798 666 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 PAUPAR-201ENST00000630360 2965 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AC116353.5-201ENST00000638148 1699 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 REXO1L11P-201ENST00000620964 1927 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AC105917.1-201ENST00000506637 2539 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms