Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 PCDH8P1-201ENST00000428983 2773 ntBASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.51■□□□□ 0.23
THUMPD3Q9BV44 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 AC096633.1-201ENST00000422446 749 ntBASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 AL049597.2-201ENST00000565575 961 ntBASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THUMPD3Q9BV44 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 AC008894.3-201ENST00000624324 3103 ntBASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 MIR662-201ENST00000384847 95 ntBASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 AL671277.2-201ENST00000458060 996 ntBASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 VENTXP5-201ENST00000523979 775 ntBASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THUMPD3Q9BV44 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms