Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC22.54■■□□□ 1.2
ABCA3Q99758 LINC00896-202ENST00000609602 2128 ntBASIC22.54■■□□□ 1.2
ABCA3Q99758 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC22.54■■□□□ 1.2
ABCA3Q99758 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC22.54■■□□□ 1.2
ABCA3Q99758 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ABCA3Q99758 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 AC106886.1-201ENST00000568660 600 ntBASIC22.54■■□□□ 1.2
ABCA3Q99758 MIR4492-201ENST00000581627 80 ntBASIC22.54■■□□□ 1.2
ABCA3Q99758 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC22.54■■□□□ 1.2
ABCA3Q99758 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
ABCA3Q99758 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ABCA3Q99758 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
ABCA3Q99758 PODN-203ENST00000395871 2744 ntTSL 5 BASIC22.53■■□□□ 1.2
ABCA3Q99758 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ABCA3Q99758 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC22.53■■□□□ 1.2
ABCA3Q99758 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ABCA3Q99758 LITAF-210ENST00000571976 548 ntTSL 2 BASIC22.53■■□□□ 1.2
ABCA3Q99758 LITAF-214ENST00000574703 486 ntTSL 2 BASIC22.53■■□□□ 1.2
ABCA3Q99758 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC22.53■■□□□ 1.2
ABCA3Q99758 AL162274.1-201ENST00000617191 1098 ntBASIC22.53■■□□□ 1.2
ABCA3Q99758 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC22.53■■□□□ 1.2
ABCA3Q99758 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ABCA3Q99758 TOP3BP1-201ENST00000420768 1380 ntBASIC22.53■■□□□ 1.2
ABCA3Q99758 AL035456.1-201ENST00000456064 1369 ntBASIC22.53■■□□□ 1.2
ABCA3Q99758 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
ABCA3Q99758 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ABCA3Q99758 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
ABCA3Q99758 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ABCA3Q99758 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ABCA3Q99758 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ABCA3Q99758 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC22.52■■□□□ 1.2
ABCA3Q99758 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ABCA3Q99758 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ABCA3Q99758 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
ABCA3Q99758 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC22.52■■□□□ 1.2
ABCA3Q99758 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
ABCA3Q99758 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ABCA3Q99758 AC135586.1-201ENST00000539323 574 ntBASIC22.52■■□□□ 1.2
ABCA3Q99758 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ABCA3Q99758 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ABCA3Q99758 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
ABCA3Q99758 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
ABCA3Q99758 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC22.52■■□□□ 1.2
ABCA3Q99758 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ABCA3Q99758 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ABCA3Q99758 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
ABCA3Q99758 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ABCA3Q99758 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
ABCA3Q99758 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC22.52■■□□□ 1.19
ABCA3Q99758 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 AC098614.1-201ENST00000368528 745 ntBASIC22.51■■□□□ 1.19
ABCA3Q99758 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC22.51■■□□□ 1.19
ABCA3Q99758 MPV17-208ENST00000405076 603 ntTSL 5 BASIC22.51■■□□□ 1.19
ABCA3Q99758 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC22.51■■□□□ 1.19
ABCA3Q99758 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC22.51■■□□□ 1.19
ABCA3Q99758 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC22.51■■□□□ 1.19
ABCA3Q99758 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC22.51■■□□□ 1.19
ABCA3Q99758 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC22.51■■□□□ 1.19
ABCA3Q99758 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC22.51■■□□□ 1.19
ABCA3Q99758 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.51■■□□□ 1.19
ABCA3Q99758 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
ABCA3Q99758 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
ABCA3Q99758 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC22.51■■□□□ 1.19
ABCA3Q99758 AC138028.4-201ENST00000564984 1845 ntBASIC22.51■■□□□ 1.19
ABCA3Q99758 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
ABCA3Q99758 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
ABCA3Q99758 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC22.51■■□□□ 1.19
ABCA3Q99758 AC055876.2-201ENST00000531834 546 ntBASIC22.51■■□□□ 1.19
ABCA3Q99758 MIR4525-201ENST00000580000 75 ntBASIC22.51■■□□□ 1.19
ABCA3Q99758 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC22.51■■□□□ 1.19
ABCA3Q99758 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC22.51■■□□□ 1.19
ABCA3Q99758 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC22.51■■□□□ 1.19
ABCA3Q99758 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.51■■□□□ 1.19
ABCA3Q99758 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ABCA3Q99758 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC22.51■■□□□ 1.19
ABCA3Q99758 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
ABCA3Q99758 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCA3Q99758 BTBD7P1-201ENST00000447253 1453 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms