Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.24■□□□□ 0.51
RAD9AQ99638 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.24■□□□□ 0.51
RAD9AQ99638 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.24■□□□□ 0.51
RAD9AQ99638 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.24■□□□□ 0.51
RAD9AQ99638 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RAD9AQ99638 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 AC007274.1-201ENST00000439805 662 ntBASIC18.24■□□□□ 0.51
RAD9AQ99638 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAD9AQ99638 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.24■□□□□ 0.51
RAD9AQ99638 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAD9AQ99638 MEIS3P1-201ENST00000495167 958 ntBASIC18.24■□□□□ 0.51
RAD9AQ99638 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.24■□□□□ 0.51
RAD9AQ99638 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.24■□□□□ 0.51
RAD9AQ99638 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.24■□□□□ 0.51
RAD9AQ99638 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.24■□□□□ 0.51
RAD9AQ99638 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.24■□□□□ 0.51
RAD9AQ99638 AL596325.1-201ENST00000563991 1082 ntBASIC18.24■□□□□ 0.51
RAD9AQ99638 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.24■□□□□ 0.51
RAD9AQ99638 MIR4453-201ENST00000584019 89 ntBASIC18.24■□□□□ 0.51
RAD9AQ99638 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 LINC01451-201ENST00000623792 534 ntBASIC18.24■□□□□ 0.51
RAD9AQ99638 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RAD9AQ99638 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.24■□□□□ 0.51
RAD9AQ99638 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAD9AQ99638 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
RAD9AQ99638 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.23■□□□□ 0.51
RAD9AQ99638 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAD9AQ99638 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAD9AQ99638 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAD9AQ99638 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.23■□□□□ 0.51
RAD9AQ99638 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAD9AQ99638 AL353732.1-201ENST00000569618 1459 ntBASIC18.23■□□□□ 0.51
RAD9AQ99638 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RAD9AQ99638 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
RAD9AQ99638 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
RAD9AQ99638 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAD9AQ99638 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RAD9AQ99638 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAD9AQ99638 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.23■□□□□ 0.51
RAD9AQ99638 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RAD9AQ99638 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAD9AQ99638 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAD9AQ99638 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAD9AQ99638 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAD9AQ99638 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAD9AQ99638 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.23■□□□□ 0.51
RAD9AQ99638 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.23■□□□□ 0.51
RAD9AQ99638 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.22■□□□□ 0.51
RAD9AQ99638 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAD9AQ99638 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RAD9AQ99638 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.22■□□□□ 0.51
RAD9AQ99638 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.22■□□□□ 0.51
RAD9AQ99638 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RAD9AQ99638 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
RAD9AQ99638 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAD9AQ99638 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAD9AQ99638 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAD9AQ99638 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAD9AQ99638 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.22■□□□□ 0.51
RAD9AQ99638 MRPS18AP1-201ENST00000414458 589 ntBASIC18.22■□□□□ 0.51
RAD9AQ99638 HCG4-201ENST00000418983 998 ntBASIC18.22■□□□□ 0.51
RAD9AQ99638 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RAD9AQ99638 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RAD9AQ99638 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RAD9AQ99638 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.22■□□□□ 0.51
RAD9AQ99638 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RAD9AQ99638 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.22■□□□□ 0.51
RAD9AQ99638 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.22■□□□□ 0.51
RAD9AQ99638 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.22■□□□□ 0.51
RAD9AQ99638 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAD9AQ99638 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAD9AQ99638 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAD9AQ99638 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAD9AQ99638 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
RAD9AQ99638 AC093503.3-201ENST00000624917 2352 ntBASIC18.22■□□□□ 0.51
RAD9AQ99638 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAD9AQ99638 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD9AQ99638 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.21■□□□□ 0.51
RAD9AQ99638 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD9AQ99638 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD9AQ99638 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAD9AQ99638 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.21■□□□□ 0.51
RAD9AQ99638 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.21■□□□□ 0.51
RAD9AQ99638 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD9AQ99638 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD9AQ99638 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.21■□□□□ 0.51
RAD9AQ99638 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD9AQ99638 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAD9AQ99638 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms