Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.22■□□□□ 0.51
CASD1Q96PB1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 TOP3BP1-201ENST00000420768 1380 ntBASIC18.21■□□□□ 0.51
CASD1Q96PB1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 HCG4-201ENST00000418983 998 ntBASIC18.21■□□□□ 0.51
CASD1Q96PB1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 IGHV3-62-201ENST00000520057 340 ntBASIC18.21■□□□□ 0.51
CASD1Q96PB1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 KRT8P23-201ENST00000560090 1207 ntBASIC18.21■□□□□ 0.51
CASD1Q96PB1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.21■□□□□ 0.51
CASD1Q96PB1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASD1Q96PB1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.21■□□□□ 0.5
CASD1Q96PB1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 UXT-AS1-201ENST00000590504 1525 ntBASIC18.2■□□□□ 0.5
CASD1Q96PB1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 RNU1-129P-201ENST00000384064 167 ntBASIC18.2■□□□□ 0.5
CASD1Q96PB1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 COX20P2-201ENST00000452636 358 ntBASIC18.2■□□□□ 0.5
CASD1Q96PB1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 AC093214.1-201ENST00000511688 1107 ntBASIC18.2■□□□□ 0.5
CASD1Q96PB1 MIR4745-201ENST00000577608 62 ntBASIC18.2■□□□□ 0.5
CASD1Q96PB1 U1.21-201ENST00000580816 167 ntBASIC18.2■□□□□ 0.5
CASD1Q96PB1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.2■□□□□ 0.5
CASD1Q96PB1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CASD1Q96PB1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CASD1Q96PB1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 AC055876.3-201ENST00000431496 288 ntBASIC18.19■□□□□ 0.5
CASD1Q96PB1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.19■□□□□ 0.5
CASD1Q96PB1 AC026150.2-201ENST00000564693 1156 ntBASIC18.19■□□□□ 0.5
CASD1Q96PB1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 AC138649.4-201ENST00000612222 287 ntBASIC18.19■□□□□ 0.5
CASD1Q96PB1 AJ011932.1-201ENST00000621707 465 ntBASIC18.19■□□□□ 0.5
CASD1Q96PB1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
CASD1Q96PB1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms