Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NLRP3Q96P20 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NLRP3Q96P20 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.12■□□□□ 0.97
NLRP3Q96P20 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NLRP3Q96P20 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.12■□□□□ 0.97
NLRP3Q96P20 AC109635.5-201ENST00000533593 962 ntBASIC21.12■□□□□ 0.97
NLRP3Q96P20 KRT8P23-201ENST00000560090 1207 ntBASIC21.12■□□□□ 0.97
NLRP3Q96P20 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.12■□□□□ 0.97
NLRP3Q96P20 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NLRP3Q96P20 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NLRP3Q96P20 AC138649.4-201ENST00000612222 287 ntBASIC21.12■□□□□ 0.97
NLRP3Q96P20 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NLRP3Q96P20 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NLRP3Q96P20 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NLRP3Q96P20 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NLRP3Q96P20 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.12■□□□□ 0.97
NLRP3Q96P20 AC133963.1-201ENST00000504166 1679 ntBASIC21.12■□□□□ 0.97
NLRP3Q96P20 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 PMS2P4-201ENST00000412466 1052 ntBASIC21.11■□□□□ 0.97
NLRP3Q96P20 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 SLC25A6P5-201ENST00000435663 894 ntBASIC21.11■□□□□ 0.97
NLRP3Q96P20 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 INGX-202ENST00000489074 768 ntBASIC21.11■□□□□ 0.97
NLRP3Q96P20 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NLRP3Q96P20 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.11■□□□□ 0.97
NLRP3Q96P20 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 UXT-AS1-201ENST00000590504 1525 ntBASIC21.1■□□□□ 0.97
NLRP3Q96P20 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 MIR943-201ENST00000401286 94 ntBASIC21.1■□□□□ 0.97
NLRP3Q96P20 KLF2P3-201ENST00000451977 1087 ntBASIC21.1■□□□□ 0.97
NLRP3Q96P20 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLRP3Q96P20 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.1■□□□□ 0.97
NLRP3Q96P20 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLRP3Q96P20 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLRP3Q96P20 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.09■□□□□ 0.97
NLRP3Q96P20 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLRP3Q96P20 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NLRP3Q96P20 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.09■□□□□ 0.97
NLRP3Q96P20 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.09■□□□□ 0.97
NLRP3Q96P20 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLRP3Q96P20 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLRP3Q96P20 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NLRP3Q96P20 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NLRP3Q96P20 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLRP3Q96P20 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NLRP3Q96P20 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NLRP3Q96P20 HCG4-201ENST00000418983 998 ntBASIC21.09■□□□□ 0.97
NLRP3Q96P20 BASP1P1-201ENST00000430708 665 ntBASIC21.09■□□□□ 0.97
NLRP3Q96P20 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NLRP3Q96P20 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.09■□□□□ 0.97
NLRP3Q96P20 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.09■□□□□ 0.97
NLRP3Q96P20 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms