Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPRD1AQ96P16 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 PI4KAP1-204ENST00000612579 1703 ntBASIC17.73■□□□□ 0.43
RPRD1AQ96P16 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 AP002414.1-201ENST00000391405 1147 ntBASIC17.73■□□□□ 0.43
RPRD1AQ96P16 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 AP000347.1-202ENST00000435868 847 ntBASIC17.73■□□□□ 0.43
RPRD1AQ96P16 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 Z83851.2-201ENST00000609564 659 ntBASIC17.73■□□□□ 0.43
RPRD1AQ96P16 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 AF228730.7-201ENST00000641842 219 ntBASIC17.73■□□□□ 0.43
RPRD1AQ96P16 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 AC116353.5-201ENST00000638148 1699 ntBASIC17.73■□□□□ 0.43
RPRD1AQ96P16 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.73■□□□□ 0.43
RPRD1AQ96P16 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 ZNF259P1-201ENST00000407656 1365 ntBASIC17.72■□□□□ 0.43
RPRD1AQ96P16 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 AC108751.1-201ENST00000490852 363 ntBASIC17.72■□□□□ 0.43
RPRD1AQ96P16 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 AC145285.3-201ENST00000564603 959 ntBASIC17.72■□□□□ 0.43
RPRD1AQ96P16 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 AC008667.4-201ENST00000607370 168 ntBASIC17.72■□□□□ 0.43
RPRD1AQ96P16 AC026471.1-201ENST00000564629 3026 ntBASIC17.72■□□□□ 0.43
RPRD1AQ96P16 OR6D1P-203ENST00000641209 4860 ntBASIC17.72■□□□□ 0.43
RPRD1AQ96P16 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPRD1AQ96P16 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms