Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITCHQ96J02 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITCHQ96J02 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ITCHQ96J02 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ITCHQ96J02 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ITCHQ96J02 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ITCHQ96J02 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITCHQ96J02 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
ITCHQ96J02 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 EGFEM1P-202ENST00000431685 1563 ntBASIC16.43■□□□□ 0.22
ITCHQ96J02 AL049757.1-201ENST00000616842 1596 ntBASIC16.43■□□□□ 0.22
ITCHQ96J02 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ITCHQ96J02 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.43■□□□□ 0.22
ITCHQ96J02 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.43■□□□□ 0.22
ITCHQ96J02 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ITCHQ96J02 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.43■□□□□ 0.22
ITCHQ96J02 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.43■□□□□ 0.22
ITCHQ96J02 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 FAM220CP-201ENST00000395253 831 ntBASIC16.43■□□□□ 0.22
ITCHQ96J02 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 KRT18P57-201ENST00000443599 1254 ntBASIC16.43■□□□□ 0.22
ITCHQ96J02 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.43■□□□□ 0.22
ITCHQ96J02 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.43■□□□□ 0.22
ITCHQ96J02 AC006011.2-201ENST00000621313 1158 ntBASIC16.43■□□□□ 0.22
ITCHQ96J02 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.43■□□□□ 0.22
ITCHQ96J02 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 LINC02199-201ENST00000506655 2702 ntBASIC16.43■□□□□ 0.22
ITCHQ96J02 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.43■□□□□ 0.22
ITCHQ96J02 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.43■□□□□ 0.22
ITCHQ96J02 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ITCHQ96J02 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.42■□□□□ 0.22
ITCHQ96J02 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.42■□□□□ 0.22
ITCHQ96J02 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
ITCHQ96J02 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ITCHQ96J02 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 SPDYE13P-201ENST00000445314 798 ntBASIC16.42■□□□□ 0.22
ITCHQ96J02 RN7SL606P-201ENST00000472779 293 ntBASIC16.42■□□□□ 0.22
ITCHQ96J02 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.42■□□□□ 0.22
ITCHQ96J02 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.42■□□□□ 0.22
ITCHQ96J02 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.42■□□□□ 0.22
ITCHQ96J02 STK25P1-201ENST00000585406 838 ntBASIC16.42■□□□□ 0.22
ITCHQ96J02 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 AL138831.2-201ENST00000606564 490 ntBASIC16.42■□□□□ 0.22
ITCHQ96J02 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ITCHQ96J02 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ITCHQ96J02 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ITCHQ96J02 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ITCHQ96J02 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ITCHQ96J02 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
ITCHQ96J02 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.42■□□□□ 0.22
ITCHQ96J02 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ITCHQ96J02 AC092068.3-201ENST00000587894 2016 ntBASIC16.41■□□□□ 0.22
ITCHQ96J02 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ITCHQ96J02 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.41■□□□□ 0.22
ITCHQ96J02 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.41■□□□□ 0.22
ITCHQ96J02 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
ITCHQ96J02 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ITCHQ96J02 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.41■□□□□ 0.22
ITCHQ96J02 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.41■□□□□ 0.22
ITCHQ96J02 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.41■□□□□ 0.22
ITCHQ96J02 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms