Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 AC006504.4-201ENST00000592118 1568 ntBASIC15.26■□□□□ 0.03
APH1AQ96BI3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 IL9RP2-201ENST00000423948 1312 ntBASIC15.25■□□□□ 0.03
APH1AQ96BI3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 AC073621.1-201ENST00000392730 636 ntBASIC15.25■□□□□ 0.03
APH1AQ96BI3 AC098831.1-202ENST00000438821 336 ntBASIC15.25■□□□□ 0.03
APH1AQ96BI3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 BX640515.1-201ENST00000617215 977 ntBASIC15.25■□□□□ 0.03
APH1AQ96BI3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.25■□□□□ 0.03
APH1AQ96BI3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APH1AQ96BI3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1AQ96BI3 CROCCP2-202ENST00000412962 2773 ntBASIC15.24■□□□□ 0.03
APH1AQ96BI3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.24■□□□□ 0.03
APH1AQ96BI3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 AC117500.6-201ENST00000624871 588 ntBASIC15.24■□□□□ 0.03
APH1AQ96BI3 AL805961.1-202ENST00000641562 540 ntBASIC15.24■□□□□ 0.03
APH1AQ96BI3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 AC020916.1-201ENST00000587762 1774 ntBASIC15.24■□□□□ 0.03
APH1AQ96BI3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1AQ96BI3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1AQ96BI3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.23■□□□□ 0.03
APH1AQ96BI3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms