Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL355312.1-201ENST00000407115 2176 ntBASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 AL020989.1-201ENST00000422979 469 ntBASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 LAGE3P1-201ENST00000425356 484 ntBASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 AC025062.2-201ENST00000605477 670 ntBASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 MIR7706-201ENST00000613747 67 ntBASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 AC107918.4-202ENST00000641623 219 ntBASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 SIRPAP1-201ENST00000448467 1770 ntBASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SH3KBP1Q96B97 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.08■□□□□ 0.33
SH3KBP1Q96B97 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3KBP1Q96B97 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
SH3KBP1Q96B97 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.08■□□□□ 0.33
SH3KBP1Q96B97 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.08■□□□□ 0.33
SH3KBP1Q96B97 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3KBP1Q96B97 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 ZNF259P1-201ENST00000407656 1365 ntBASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 AC003669.1-201ENST00000334569 611 ntBASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 SPDYE21P-201ENST00000413323 827 ntBASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 PMS2P1-201ENST00000431037 1228 ntBASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 AC008735.5-201ENST00000623544 497 ntBASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 LINC01451-201ENST00000623792 534 ntBASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 AC116407.3-201ENST00000623905 1129 ntBASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 PP12613-201ENST00000424958 2230 ntBASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SH3KBP1Q96B97 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 AC243591.1-201ENST00000452967 1364 ntBASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms