Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC4Q92889 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ERCC4Q92889 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC4Q92889 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ERCC4Q92889 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC4Q92889 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC4Q92889 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC4Q92889 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ERCC4Q92889 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC4Q92889 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC4Q92889 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC4Q92889 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC4Q92889 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC4Q92889 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC4Q92889 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC4Q92889 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 CICP6-201ENST00000457191 2729 ntBASIC19.55■□□□□ 0.72
ERCC4Q92889 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.55■□□□□ 0.72
ERCC4Q92889 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ERCC4Q92889 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 TSPY22P-201ENST00000427496 604 ntBASIC19.55■□□□□ 0.72
ERCC4Q92889 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC4Q92889 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.55■□□□□ 0.72
ERCC4Q92889 AC125634.1-201ENST00000438758 1403 ntBASIC19.55■□□□□ 0.72
ERCC4Q92889 FAM210CP-201ENST00000445714 574 ntBASIC19.55■□□□□ 0.72
ERCC4Q92889 AL671277.2-201ENST00000458060 996 ntBASIC19.55■□□□□ 0.72
ERCC4Q92889 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.55■□□□□ 0.72
ERCC4Q92889 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.55■□□□□ 0.72
ERCC4Q92889 AL049757.1-201ENST00000616842 1596 ntBASIC19.55■□□□□ 0.72
ERCC4Q92889 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
ERCC4Q92889 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ERCC4Q92889 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ERCC4Q92889 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC4Q92889 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC4Q92889 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ERCC4Q92889 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ERCC4Q92889 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC4Q92889 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC4Q92889 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ERCC4Q92889 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 AC022616.7-201ENST00000525383 220 ntBASIC19.54■□□□□ 0.72
ERCC4Q92889 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.54■□□□□ 0.72
ERCC4Q92889 AL592071.1-201ENST00000611956 408 ntBASIC19.54■□□□□ 0.72
ERCC4Q92889 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC4Q92889 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ERCC4Q92889 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ERCC4Q92889 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC4Q92889 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ERCC4Q92889 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC4Q92889 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC4Q92889 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
ERCC4Q92889 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.53■□□□□ 0.72
ERCC4Q92889 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC4Q92889 KRT8P10-201ENST00000450021 1447 ntBASIC19.53■□□□□ 0.72
ERCC4Q92889 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.53■□□□□ 0.72
ERCC4Q92889 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.53■□□□□ 0.72
ERCC4Q92889 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC4Q92889 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ERCC4Q92889 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.53■□□□□ 0.72
ERCC4Q92889 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC4Q92889 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
ERCC4Q92889 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms