Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TTC9Q92623 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC9Q92623 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9Q92623 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC9Q92623 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9Q92623 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TTC9Q92623 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 AC004449.1-201ENST00000564240 433 ntBASIC16.4■□□□□ 0.22
TTC9Q92623 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC9Q92623 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9Q92623 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC9Q92623 AL589182.2-201ENST00000619332 1049 ntBASIC16.4■□□□□ 0.22
TTC9Q92623 AC004706.3-202ENST00000621574 984 ntBASIC16.4■□□□□ 0.22
TTC9Q92623 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9Q92623 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC9Q92623 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9Q92623 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.4■□□□□ 0.22
TTC9Q92623 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.39■□□□□ 0.22
TTC9Q92623 KRT8P47-201ENST00000604727 1398 ntBASIC16.39■□□□□ 0.21
TTC9Q92623 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC9Q92623 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC9Q92623 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC9Q92623 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 ELK2BP-201ENST00000415014 1224 ntBASIC16.39■□□□□ 0.21
TTC9Q92623 AC096633.1-201ENST00000422446 749 ntBASIC16.39■□□□□ 0.21
TTC9Q92623 AC007967.3-201ENST00000434308 558 ntBASIC16.39■□□□□ 0.21
TTC9Q92623 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC9Q92623 PDPK2P-202ENST00000562415 1191 ntBASIC16.39■□□□□ 0.21
TTC9Q92623 AC005498.2-205ENST00000593218 784 ntBASIC16.39■□□□□ 0.21
TTC9Q92623 AL035252.4-201ENST00000624174 288 ntBASIC16.39■□□□□ 0.21
TTC9Q92623 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TTC9Q92623 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
TTC9Q92623 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC9Q92623 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TTC9Q92623 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC9Q92623 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC9Q92623 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC9Q92623 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9Q92623 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC9Q92623 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.38■□□□□ 0.21
TTC9Q92623 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TTC9Q92623 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC9Q92623 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TTC9Q92623 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.38■□□□□ 0.21
TTC9Q92623 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC9Q92623 ACTG1P14-201ENST00000446382 1122 ntBASIC16.38■□□□□ 0.21
TTC9Q92623 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.38■□□□□ 0.21
TTC9Q92623 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.38■□□□□ 0.21
TTC9Q92623 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.38■□□□□ 0.21
TTC9Q92623 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.38■□□□□ 0.21
TTC9Q92623 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.38■□□□□ 0.21
TTC9Q92623 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TTC9Q92623 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9Q92623 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC9Q92623 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.38■□□□□ 0.21
TTC9Q92623 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TTC9Q92623 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms