Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 UPF3AP3-201ENST00000420996 769 ntBASIC16.29■□□□□ 0.2
TM9SF4Q92544 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 PGAM5P1-201ENST00000518923 814 ntBASIC16.29■□□□□ 0.2
TM9SF4Q92544 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 AC012640.2-201ENST00000561606 901 ntBASIC16.29■□□□□ 0.2
TM9SF4Q92544 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 AC011676.5-201ENST00000624864 2660 ntBASIC16.29■□□□□ 0.2
TM9SF4Q92544 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 NKILA-202ENST00000614771 2598 ntBASIC16.29■□□□□ 0.2
TM9SF4Q92544 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 UNC93B6-202ENST00000528242 690 ntBASIC16.28■□□□□ 0.2
TM9SF4Q92544 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 AC002347.1-201ENST00000569543 541 ntBASIC16.28■□□□□ 0.2
TM9SF4Q92544 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM9SF4Q92544 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TM9SF4Q92544 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 PMPCAP1-201ENST00000508114 1576 ntBASIC16.27■□□□□ 0.2
TM9SF4Q92544 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms