Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC22.41■■□□□ 1.18
RAPGEF4Q8WZA2 AL353732.1-201ENST00000569618 1459 ntBASIC22.41■■□□□ 1.18
RAPGEF4Q8WZA2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAPGEF4Q8WZA2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 HCG11-201ENST00000411553 5696 ntBASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 AC107890.1-201ENST00000422478 521 ntBASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 AC125807.1-201ENST00000483097 614 ntBASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.4■■□□□ 1.18
RAPGEF4Q8WZA2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAPGEF4Q8WZA2 AL355312.1-201ENST00000407115 2176 ntBASIC22.39■■□□□ 1.18
RAPGEF4Q8WZA2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
RAPGEF4Q8WZA2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.39■■□□□ 1.18
RAPGEF4Q8WZA2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.39■■□□□ 1.18
RAPGEF4Q8WZA2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC22.39■■□□□ 1.18
RAPGEF4Q8WZA2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAPGEF4Q8WZA2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.39■■□□□ 1.18
RAPGEF4Q8WZA2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAPGEF4Q8WZA2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 HCG4-201ENST00000418983 998 ntBASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 AC026150.2-201ENST00000564693 1156 ntBASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
RAPGEF4Q8WZA2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 AC133963.1-201ENST00000504166 1679 ntBASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.37■■□□□ 1.17
RAPGEF4Q8WZA2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms