Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 CROCCP5-201ENST00000436658 830 ntBASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 AL355355.2-201ENST00000442321 338 ntBASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 AC104390.1-201ENST00000555663 520 ntBASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 CR392000.1-201ENST00000624770 1228 ntBASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM11BQ8TCY0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 AC126177.1-201ENST00000547829 2218 ntBASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 KRT8P47-201ENST00000604727 1398 ntBASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 AC124947.2-201ENST00000547118 1133 ntBASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 MIR4674-201ENST00000582457 87 ntBASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 AP000692.2-201ENST00000608391 879 ntBASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 MIR6786-201ENST00000616843 113 ntBASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
SMIM11BQ8TCY0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms