Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 AC009078.2-202ENST00000463353 338 ntBASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 AL355877.3-201ENST00000622820 899 ntBASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PCDH19Q8TAB3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH19Q8TAB3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH19Q8TAB3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH19Q8TAB3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.77■□□□□ 0.43
PCDH19Q8TAB3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDH19Q8TAB3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH19Q8TAB3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDH19Q8TAB3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH19Q8TAB3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH19Q8TAB3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 AKR1C7P-201ENST00000305623 895 ntBASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 FGFR3P6-201ENST00000457012 610 ntBASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 REXO1L6P-202ENST00000619970 1078 ntBASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 AL356309.3-201ENST00000624132 1934 ntBASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH19Q8TAB3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 AC104692.2-201ENST00000603054 253 ntBASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 AC064862.7-201ENST00000604520 867 ntBASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 AL139288.1-201ENST00000623748 933 ntBASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 AL022326.1-202ENST00000641533 845 ntBASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms