Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 AL732292.2-201ENST00000609649 430 ntBASIC16.12■□□□□ 0.17
NUP43Q8NFH3 AL121772.3-201ENST00000610840 674 ntBASIC16.12■□□□□ 0.17
NUP43Q8NFH3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 NKILA-202ENST00000614771 2598 ntBASIC16.12■□□□□ 0.17
NUP43Q8NFH3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 AC097637.2-201ENST00000624096 1997 ntBASIC16.11■□□□□ 0.17
NUP43Q8NFH3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 ACTG1P4-201ENST00000425123 1122 ntBASIC16.11■□□□□ 0.17
NUP43Q8NFH3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 AC073592.4-201ENST00000623827 446 ntBASIC16.11■□□□□ 0.17
NUP43Q8NFH3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUP43Q8NFH3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 GPR89P-201ENST00000407924 1495 ntBASIC16.1■□□□□ 0.17
NUP43Q8NFH3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 KRT18P31-201ENST00000506277 1292 ntBASIC16.1■□□□□ 0.17
NUP43Q8NFH3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 PRELID1P1-202ENST00000567272 903 ntBASIC16.1■□□□□ 0.17
NUP43Q8NFH3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 AC011676.5-201ENST00000624864 2660 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms